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It seems to work.

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m4/pandora_plugins.m4
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  dnl get called probably during autoconf too, so it's important to protect
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  dnl with test -f ... if the files exist, we don't have the chicken/egg 
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  dnl problem and therefore don't need to do anything here
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  m4_syscmd([test -f config/plugin.stamp || python config/register_plugins.py . . > /dev/null])
 
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  m4_syscmd([python config/register_plugins.py > /dev/null])
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  m4_syscmd([test -f config/plugin.stamp || touch config/plugin.stamp aclocal.m4])
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  m4_sinclude(config/plugin-list.ac)
 
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  m4_sinclude(config/pandora-plugin.ac)
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  dnl Add code here to read set plugin lists and  set drizzled_default_plugin_list
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  pandora_builtin_list=`echo $pandora_builtin_list | sed 's/, *$//'`